SO and RNAO swap meet PowerPoint PPT Presentation

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Title: SO and RNAO swap meet


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SO and RNAO swap meet
  • ROC meeting
  • Madison May 2009

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SO terms that belong in RNAO
  • Please accept the following SO terms

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Sequence_secondary_structure
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RNA_motif
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Check for usage
  • Use SO wiki to find if terms are used in
    annotation of model organism sequence.

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Requirements
  • RNAO - accessible to SO community
  • The terms to be in RNAO
  • SO to point to the IDs of the moved terms in RNAO
  • Notice to be given to the developer community
    about the move - Especially the NLP community.

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Considerations
  • Some of the structural terms can be applied to
    DNA.
  • Will RNAO be available to those wishing to
    annotate structural features of DNA, should the
    need arise?

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Terms to be added to SO
  • At the January Cambridge meeting, the following
    terms were requested by RNAO
  • Collection_of_regions
  • Overlapping_collection_of_regions
  • Non_overlapping_collection_of_regions

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Requirements
  • To be added as is_a children of
    sequence_collection
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