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Biological Databases PowerPoint PPT Presentation
Biological Databases - SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules ... Formulating queries is a serious issue in biological databases. ...
SWISS-3DIMAGE - 3D images of proteins and other biological macromolecules ... Formulating queries is a serious issue in biological databases. ...
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Principles of purification of macromolecules PowerPoint PPT Presentation
Principles of purification of macromolecules - Principles of purification of macromolecules Genetics 222 Method and Logic in Experimental Genetics Reference Protein Purification: Principles and Practice
Principles of purification of macromolecules Genetics 222 Method and Logic in Experimental Genetics Reference Protein Purification: Principles and Practice
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Protein Database PowerPoint PPT Presentation
Protein Database - Protein Database Bioinformatics Lab Sequence Databases GenBank--DNA sequences and derived protein sequences EMBL --DNA sequences and derived protein sequences DDBJ ...
Protein Database Bioinformatics Lab Sequence Databases GenBank--DNA sequences and derived protein sequences EMBL --DNA sequences and derived protein sequences DDBJ ...
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An introduction to biological databases PowerPoint PPT Presentation
An introduction to biological databases - biological databases Database or databank ? At the beginning, subtle distinctions were done between databases and databanks (in UK, but not in the USA), such as ...
biological databases Database or databank ? At the beginning, subtle distinctions were done between databases and databanks (in UK, but not in the USA), such as ...
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PDB database  http://www.pdb.org/ PowerPoint PPT Presentation
PDB database http://www.pdb.org/ - Title: PDB database http://www.pdb.org/ Author: avarsani Last modified by: dwilliamson Created Date: 6/4/2004 2:42:04 PM Document presentation format
Title: PDB database http://www.pdb.org/ Author: avarsani Last modified by: dwilliamson Created Date: 6/4/2004 2:42:04 PM Document presentation format
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An introduction to biological databases PowerPoint PPT Presentation
An introduction to biological databases - biological databases August 2001 Database or databank ? At the beginning, subtle distinctions were done between databases and databanks (in UK, but not in the USA ...
biological databases August 2001 Database or databank ? At the beginning, subtle distinctions were done between databases and databanks (in UK, but not in the USA ...
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An introduction to biological databases PowerPoint PPT Presentation
An introduction to biological databases - Title: An introduction to informatics Author: Victor Jongeneel Last modified by: Laurent Falquet Created Date: 8/25/1998 3:04:54 PM Document presentation format
Title: An introduction to informatics Author: Victor Jongeneel Last modified by: Laurent Falquet Created Date: 8/25/1998 3:04:54 PM Document presentation format
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New Developments in the Pathway Tools Software and EcoCyc Database PowerPoint PPT Presentation
New Developments in the Pathway Tools Software and EcoCyc Database - Title: BioCyc Author: Peter Karp Last modified by: Peter Karp Created Date: 6/2/1995 10:19:30 PM Document presentation format: On-screen Show Other titles
Title: BioCyc Author: Peter Karp Last modified by: Peter Karp Created Date: 6/2/1995 10:19:30 PM Document presentation format: On-screen Show Other titles
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Principles of purification of macromolecules PowerPoint PPT Presentation
Principles of purification of macromolecules - must already know something about the DNA sequence ... DNA sequencing ... not as hardy as DNA, although easier to work with than proteins if special care ...
must already know something about the DNA sequence ... DNA sequencing ... not as hardy as DNA, although easier to work with than proteins if special care ...
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Introduction to biological databases 2 PowerPoint PPT Presentation
Introduction to biological databases 2 - PRINTS Aligned motifs. Pfam HMM (Hidden Markov Models) SMART HMM. TIGRfam HMM. DOMO Aligned motifs ... ATOM 2 CA ALA A 1 -37.691 14.156 98.995 1.00 72.12 C ...
PRINTS Aligned motifs. Pfam HMM (Hidden Markov Models) SMART HMM. TIGRfam HMM. DOMO Aligned motifs ... ATOM 2 CA ALA A 1 -37.691 14.156 98.995 1.00 72.12 C ...
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Protein Structure, Databases and Structural Alignment PowerPoint PPT Presentation
Protein Structure, Databases and Structural Alignment - Proteins are fundamental components of all living cells, performing a variety of ... Luckily, nature works out with these sorts of numbers and the correct ...
Proteins are fundamental components of all living cells, performing a variety of ... Luckily, nature works out with these sorts of numbers and the correct ...
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Macromolecular Structure Database group PowerPoint PPT Presentation
Macromolecular Structure Database group - Many protein (and some nucleic acids) structures have evolved as a framework for ... These are HETATM & non-protein/non-nucleic-acid/non-water residues. ...
Many protein (and some nucleic acids) structures have evolved as a framework for ... These are HETATM & non-protein/non-nucleic-acid/non-water residues. ...
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A New Analytical Method for Computing SolventAccessible Surface Area of Macromolecules PowerPoint PPT Presentation
A New Analytical Method for Computing SolventAccessible Surface Area of Macromolecules - can be labeled by the local polar coordinates through the following equations ... the algorithm reads the coordinates and radii of the atoms, the algorithm ...
can be labeled by the local polar coordinates through the following equations ... the algorithm reads the coordinates and radii of the atoms, the algorithm ...
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Microarray Gene Expression Database MGED Ontology Working Group PowerPoint PPT Presentation
Microarray Gene Expression Database MGED Ontology Working Group - Cell source: in-house bred mice (contact: norma.howells@itg.fzk. ... Developmental stage: stage 28 (juvenile (young) mice) [ GXD 'Mouse Anatomical Dictionary' ...
Cell source: in-house bred mice (contact: norma.howells@itg.fzk. ... Developmental stage: stage 28 (juvenile (young) mice) [ GXD 'Mouse Anatomical Dictionary' ...
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Entrez Retrieval System ... PowerPoint PPT Presentation
Entrez Retrieval System ... - Part 3: Essentials Why Are Small Molecules Important? Constituents to all macromolecules (DNA, RNA, protein, carbohydrates, etc.) Serve as cofactors and signaling ...
Part 3: Essentials Why Are Small Molecules Important? Constituents to all macromolecules (DNA, RNA, protein, carbohydrates, etc.) Serve as cofactors and signaling ...
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Biological sequence analysis PowerPoint PPT Presentation
Biological sequence analysis - Stat 246, Lecture 3 Biological sequence analysis The objects of our study DNA, RNA and proteins: macromolecules which are unbranched polymers built up from smaller units.
Stat 246, Lecture 3 Biological sequence analysis The objects of our study DNA, RNA and proteins: macromolecules which are unbranched polymers built up from smaller units.
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Archives and Information Retrieval PowerPoint PPT Presentation
Archives and Information Retrieval - What is the general arrangement of biological data in the public ... SCOP. Nucleic acid sequence databases. International DNA Sequence Database Collaboration ...
What is the general arrangement of biological data in the public ... SCOP. Nucleic acid sequence databases. International DNA Sequence Database Collaboration ...
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Bioinformatics: Overview and Future Challenges PowerPoint PPT Presentation
Bioinformatics: Overview and Future Challenges - 9/27/09. MDSC 755. 1. Bioinformatics: Overview and Future Challenges. Melissa Dobson ... Bioinformatics is conceptualizing biology in terms of macromolecules and then ...
9/27/09. MDSC 755. 1. Bioinformatics: Overview and Future Challenges. Melissa Dobson ... Bioinformatics is conceptualizing biology in terms of macromolecules and then ...
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Challenges in visualization of complexes and the PDB PowerPoint PPT Presentation
Challenges in visualization of complexes and the PDB - ... (used for describing small molecule structures) to describe macromolecules. ... (also called a biological unit) is the macromolecule that has been shown to be or ...
... (used for describing small molecule structures) to describe macromolecules. ... (also called a biological unit) is the macromolecule that has been shown to be or ...
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CS 177     Introduction to Bioinformatics PowerPoint PPT Presentation
CS 177 Introduction to Bioinformatics - ... careers. Course ... The Institute manages databases of biological data including ... tools and approaches for expanding the use of biological, medical, ...
... careers. Course ... The Institute manages databases of biological data including ... tools and approaches for expanding the use of biological, medical, ...
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BioMedical Applications PowerPoint PPT Presentation
BioMedical Applications - ... develop a European-wide database of mammograms that will be used to investigate ... capable of managing federated mammogram databases distributed in Cambridge, ...
... develop a European-wide database of mammograms that will be used to investigate ... capable of managing federated mammogram databases distributed in Cambridge, ...
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Solutions for Cheminformatics PowerPoint PPT Presentation
Solutions for Cheminformatics - Cartridge, enhanced stereo searching, recursive SMARTS, Chemical Terms, virtual synthesis ... Used 1.8 million vendor compounds to create a testing database ...
Cartridge, enhanced stereo searching, recursive SMARTS, Chemical Terms, virtual synthesis ... Used 1.8 million vendor compounds to create a testing database ...
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Introduction to Computational Biosciences and Bioinformatics PowerPoint PPT Presentation
Introduction to Computational Biosciences and Bioinformatics - ... and data visualization/ analysis tools such as Spotfire Solid understanding of relational databases and familiarity with Oracle and/ or SQL server Good ...
... and data visualization/ analysis tools such as Spotfire Solid understanding of relational databases and familiarity with Oracle and/ or SQL server Good ...
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MA /GENERAL_SPEC: ALPHABET ... 3D structure Contain the PowerPoint PPT Presentation
MA /GENERAL_SPEC: ALPHABET ... 3D structure Contain the - MA /GENERAL_SPEC: ALPHABET ... 3D structure Contain the spatial coordinates of macromolecules whose 3D structure has been obtained by X-ray or NMR ...
MA /GENERAL_SPEC: ALPHABET ... 3D structure Contain the spatial coordinates of macromolecules whose 3D structure has been obtained by X-ray or NMR ...
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Bioinformatics and sequence analysis PowerPoint PPT Presentation
Bioinformatics and sequence analysis - Deduction of knowledge by computer analysis. of biological data. ... Compilations of links to databases. at Institut Pasteur. www.pasteur.fr/recherche/banques ...
Deduction of knowledge by computer analysis. of biological data. ... Compilations of links to databases. at Institut Pasteur. www.pasteur.fr/recherche/banques ...
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Sequence, Classification, Alignment and Structural Libraries PowerPoint PPT Presentation
Sequence, Classification, Alignment and Structural Libraries - Nucleic Acids ... of primary sources including translations of nucleic acid sequences. ... Nucleic Acid classification libraries: Transcription Factor Database ...
Nucleic Acids ... of primary sources including translations of nucleic acid sequences. ... Nucleic Acid classification libraries: Transcription Factor Database ...
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Macromolecular Structure at SDSC PowerPoint PPT Presentation
Macromolecular Structure at SDSC - NATIONAL PARTNERSHIP FOR ADVANCED COMPUTATIONAL INFRASTRUCTURE ... Modeling Biological Macromolecules. http://chemcca10.ucsd.edu/~chem215. Pharm 207/Bio 207: ...
NATIONAL PARTNERSHIP FOR ADVANCED COMPUTATIONAL INFRASTRUCTURE ... Modeling Biological Macromolecules. http://chemcca10.ucsd.edu/~chem215. Pharm 207/Bio 207: ...
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Unit 3. Basic of Biopolymers (3) Control of Protein Function PowerPoint PPT Presentation
Unit 3. Basic of Biopolymers (3) Control of Protein Function - ... bound in a complex with other macromolecules that participate in its function. ... Effectors may be as small as a proton or as large as another macromolecule. ...
... bound in a complex with other macromolecules that participate in its function. ... Effectors may be as small as a proton or as large as another macromolecule. ...
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Collaboratory for Multiscale Chemical Sciences CMCS New Informatics Capabilities for CHEMKIN users PowerPoint PPT Presentation
Collaboratory for Multiscale Chemical Sciences CMCS New Informatics Capabilities for CHEMKIN users - 13. June 2004. http://cmcs.org/ CMCS Pilot Databases, Applications ... Development and publishing chemical reaction models, interfaced with NIST/PrIMe Data Warehouse ...
13. June 2004. http://cmcs.org/ CMCS Pilot Databases, Applications ... Development and publishing chemical reaction models, interfaced with NIST/PrIMe Data Warehouse ...
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Study of Gene Expression: Statistics, Biology, and Microarrays PowerPoint PPT Presentation
Study of Gene Expression: Statistics, Biology, and Microarrays - Study of Gene Expression: Statistics, Biology, and Microarrays Ker-Chau Li Statistics Department UCLA kcli@stat.ucla.edu PART I. Cellular Biology Macromolecules: DNA ...
Study of Gene Expression: Statistics, Biology, and Microarrays Ker-Chau Li Statistics Department UCLA kcli@stat.ucla.edu PART I. Cellular Biology Macromolecules: DNA ...
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Confessions/Disclaimers PowerPoint PPT Presentation
Confessions/Disclaimers - includes links to other relevant databases ... zebrafish (ZFIN) Drosophila (FlyBase) human (FMA) amphibians. cyprinoforme fishes ...
includes links to other relevant databases ... zebrafish (ZFIN) Drosophila (FlyBase) human (FMA) amphibians. cyprinoforme fishes ...
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THE CHALLENGES OF GENOME INFORMATION MANAGEMENT PowerPoint PPT Presentation
THE CHALLENGES OF GENOME INFORMATION MANAGEMENT - many databases, many tools, many nomenclatures Shamkant B. Navathe. 6 ... Using different nomenclature. Quality Control is a major Issue ...
many databases, many tools, many nomenclatures Shamkant B. Navathe. 6 ... Using different nomenclature. Quality Control is a major Issue ...
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Tools in bioinformatics PowerPoint PPT Presentation
Tools in bioinformatics - To provide students with practical knowledge of bioinformatics tools and their ... Mathematically, we use the hypergeometric distribution to compute the ...
To provide students with practical knowledge of bioinformatics tools and their ... Mathematically, we use the hypergeometric distribution to compute the ...
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Data Acquisition Tools PowerPoint PPT Presentation
Data Acquisition Tools - DNA sequencing is performed using an automated version of ... Affinity methods. Affinity chromatography. Co-immunoprecipitation. Molecular and atomic methods ...
DNA sequencing is performed using an automated version of ... Affinity methods. Affinity chromatography. Co-immunoprecipitation. Molecular and atomic methods ...
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college biotechnologie PowerPoint PPT Presentation
college biotechnologie - A Roadmap for Mass Spectrometry Analysis of Proteomics and Metabolomics DR. SYED GHULAM MUSHARRAF ASSOCIATE PROFESSOR HEJ RESEARCFJH INSTITUTE OF CHEMISTRY
A Roadmap for Mass Spectrometry Analysis of Proteomics and Metabolomics DR. SYED GHULAM MUSHARRAF ASSOCIATE PROFESSOR HEJ RESEARCFJH INSTITUTE OF CHEMISTRY
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Essential%20concepts%20and%20tools%20in%20bioinformatics%20and%20computational%20biology PowerPoint PPT Presentation
Essential%20concepts%20and%20tools%20in%20bioinformatics%20and%20computational%20biology - What is bioinformatics and computational biology, and why is it so important? ... Bioinformatics. Genome Mapping. Molecular Modeling. SNPs (single nucleotide ...
What is bioinformatics and computational biology, and why is it so important? ... Bioinformatics. Genome Mapping. Molecular Modeling. SNPs (single nucleotide ...
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Announcements PowerPoint PPT Presentation
Announcements - Title: PowerPoint Presentation to accompany Life: The Science of Biology, Seventh Edition Author: Sinauer Associates, Inc. and W.H. Freeman & Co.
Title: PowerPoint Presentation to accompany Life: The Science of Biology, Seventh Edition Author: Sinauer Associates, Inc. and W.H. Freeman & Co.
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What is Bioinformatics PowerPoint PPT Presentation
What is Bioinformatics - ... the need for storing and communicating large datasets has grown tremendously. ... EMBL www.ebi.ac.uk/embl/ The EMBL (European Molecular Biology Laboratory) ...
... the need for storing and communicating large datasets has grown tremendously. ... EMBL www.ebi.ac.uk/embl/ The EMBL (European Molecular Biology Laboratory) ...
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Information Management for Genome Level Bioinformatics PowerPoint PPT Presentation
Information Management for Genome Level Bioinformatics - Title: Incremental Maintenance of Materialized OQL Views Author: Norman Paton Last modified by: norm Created Date: 11/4/2000 11:38:08 AM Document presentation format
Title: Incremental Maintenance of Materialized OQL Views Author: Norman Paton Last modified by: norm Created Date: 11/4/2000 11:38:08 AM Document presentation format
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Roland Stenutz PowerPoint PPT Presentation
Roland Stenutz - Web resources for the Carbohydrate Chemist. Roland Stenutz. Stockholm University ... Het-PDB Navi. daisy.bio.nagoya-u.ac.jp/golab/hetpdbnavi.html ...
Web resources for the Carbohydrate Chemist. Roland Stenutz. Stockholm University ... Het-PDB Navi. daisy.bio.nagoya-u.ac.jp/golab/hetpdbnavi.html ...
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K' SEKAR, Ph'D' PowerPoint PPT Presentation
K' SEKAR, Ph'D' - Bioinformatics Centre & Supercomputer Education and Research Centre ... understand the amassed information in term of protein structure function and evolution. ...
Bioinformatics Centre & Supercomputer Education and Research Centre ... understand the amassed information in term of protein structure function and evolution. ...
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Pathway Tools / BioCyc Fundamentals PowerPoint PPT Presentation
Pathway Tools / BioCyc Fundamentals - Pathway Tools / BioCyc Fundamentals Peter D. Karp, Ph.D. Bioinformatics Research Group SRI International pkarp@ai.sri.com BioCyc.org EcoCyc.org, MetaCyc.org, HumanCyc.org
Pathway Tools / BioCyc Fundamentals Peter D. Karp, Ph.D. Bioinformatics Research Group SRI International pkarp@ai.sri.com BioCyc.org EcoCyc.org, MetaCyc.org, HumanCyc.org
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Introduction of NCBI overview PowerPoint PPT Presentation
Introduction of NCBI overview - Genome information resources (????????) DNA sequence analysis(??????) ... Searched directly using any search term or phrase (in the same way as the ...
Genome information resources (????????) DNA sequence analysis(??????) ... Searched directly using any search term or phrase (in the same way as the ...
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Protein structure prediction PowerPoint PPT Presentation
Protein structure prediction - Turns. Chou-Fasman. First widely used procedure ... Position-dependent propensities for helix, sheet or turn is calculated for each amino acid. ...
Turns. Chou-Fasman. First widely used procedure ... Position-dependent propensities for helix, sheet or turn is calculated for each amino acid. ...
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Protein Structure PowerPoint PPT Presentation
Protein Structure - Used a two-stage neural network to predict structure based on position specific ... If the alignment produces a high score, then the match is given. ...
Used a two-stage neural network to predict structure based on position specific ... If the alignment produces a high score, then the match is given. ...
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Persistent object-oriented hyper-graph model for Maximal Common Substructure (MCS) search PowerPoint PPT Presentation
Persistent object-oriented hyper-graph model for Maximal Common Substructure (MCS) search - Persistent object-oriented hyper-graph model for Maximal Common Substructure (MCS) search Milorad Tosic, Ph.D. Rutgers, The State University of New Jersey
Persistent object-oriented hyper-graph model for Maximal Common Substructure (MCS) search Milorad Tosic, Ph.D. Rutgers, The State University of New Jersey
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BALBES (Current working name) A. Vagin, F. Long, J. Foadi, A. Lebedev G. Murshudov  Chemistry Department, University of York PowerPoint PPT Presentation
BALBES (Current working name) A. Vagin, F. Long, J. Foadi, A. Lebedev G. Murshudov Chemistry Department, University of York - The number of entries in the Protein data bank (PDB) is increasing every year. ... averaged phased translation function, dyad search, search with one model fixed etc ...
The number of entries in the Protein data bank (PDB) is increasing every year. ... averaged phased translation function, dyad search, search with one model fixed etc ...
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The Bioinformatics of Small Molecules PowerPoint PPT Presentation
The Bioinformatics of Small Molecules - BIND/SMID Genome Canada initiative. KEGG Japanese initiative. ChEBI European initiative ... http://redpoll.pharmacy.ualberta.ca/drugbank/ DrugBank ...
BIND/SMID Genome Canada initiative. KEGG Japanese initiative. ChEBI European initiative ... http://redpoll.pharmacy.ualberta.ca/drugbank/ DrugBank ...
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Mass Spectrometry-Based Methods for Protein Identification PowerPoint PPT Presentation
Mass Spectrometry-Based Methods for Protein Identification - Mass Spectrometry-Based Methods for Protein Identification Joseph A. Loo Department of Biological Chemistry David Geffen School of Medicine Department of Chemistry ...
Mass Spectrometry-Based Methods for Protein Identification Joseph A. Loo Department of Biological Chemistry David Geffen School of Medicine Department of Chemistry ...
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Course Sequence Analysis for Bioinformatics Master PowerPoint PPT Presentation
Course Sequence Analysis for Bioinformatics Master - Title: Finding Patterns in Protein Sequence and Structure Author: mathbio Last modified by: heringa Created Date: 6/9/2002 12:55:37 AM Document presentation format
Title: Finding Patterns in Protein Sequence and Structure Author: mathbio Last modified by: heringa Created Date: 6/9/2002 12:55:37 AM Document presentation format
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Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosi PowerPoint PPT Presentation
Institute of Cytology and Genetics of the Siberian Branch of the Russian Academy of Sciences, Novosi - Institute of Cytology and Genetics. of the Siberian Branch. of the Russian Academy of Sciences, ... Institute of Cytology and Genetics. Novosibirsk, Russia ...
Institute of Cytology and Genetics. of the Siberian Branch. of the Russian Academy of Sciences, ... Institute of Cytology and Genetics. Novosibirsk, Russia ...
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Chinese National Committee for CODATA: Mission and development PowerPoint PPT Presentation
Chinese National Committee for CODATA: Mission and development - Background (Name list) President Chen Yiyu(NSFC, CAS) Vice president:Yan Baoping(CNIC) ... Feb. 28th-Mar. 1st of 2003, President of CODATA Shuichi Iwata being with us. ...
Background (Name list) President Chen Yiyu(NSFC, CAS) Vice president:Yan Baoping(CNIC) ... Feb. 28th-Mar. 1st of 2003, President of CODATA Shuichi Iwata being with us. ...
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Plegamiento de prote PowerPoint PPT Presentation
Plegamiento de prote - Title: Como la evoluci n modif ca la estabilidad de las prote nas Author: van Ham Last modified by: van Ham Created Date: 11/29/2001 10:45:02 AM
Title: Como la evoluci n modif ca la estabilidad de las prote nas Author: van Ham Last modified by: van Ham Created Date: 11/29/2001 10:45:02 AM
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Introduction to Computational Molecular and Cell Biology PowerPoint PPT Presentation
Introduction to Computational Molecular and Cell Biology - Introduction to Computational Molecular and Cell Biology
Introduction to Computational Molecular and Cell Biology
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LSM2104/CZ2251 PowerPoint PPT Presentation
LSM2104/CZ2251 - Protein Structure and Visualization (2) Chen Yu Zong csccyz@nus.edu.sg 6874-6877 LSM2104/CZ2251 Essential Bioinformatics and Biocomputing Only deposited data is ...
Protein Structure and Visualization (2) Chen Yu Zong csccyz@nus.edu.sg 6874-6877 LSM2104/CZ2251 Essential Bioinformatics and Biocomputing Only deposited data is ...
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Mascot Example Slides PowerPoint PPT Presentation
Mascot Example Slides - Mass spectrometry-based proteomics. Nature ... MS Web addresses of some representative internet resources for protein identification from mass spectrometry ...
Mass spectrometry-based proteomics. Nature ... MS Web addresses of some representative internet resources for protein identification from mass spectrometry ...
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