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BioMed Central, Open Access Publishing, and Digital Archiving

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Cost per article access for Elsevier journals estimated at approx US $11 ... Scientist-run online journals. Editorial board determines acceptance policy ... – PowerPoint PPT presentation

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Title: BioMed Central, Open Access Publishing, and Digital Archiving


1
BioMed Central,Open Access Publishing, and
Digital Archiving
Matthew CockerillTechnical Director, BioMed
Central
2
Summary of talk
  • What is Open Access publishing and why is it
    necessary?
  • The growth of BioMed Central as an Open Access
    publisher
  • The benefits of Open Access for Digital
    Archiving

3
Summary of talk
  • What is Open Access Publishing and why is it
    necessary?
  • The growth of BioMed Central as an Open Access
    publisher
  • The benefits of Open Access for Digital
    Archiving

4
The current model of publishing scientific
research
  • Scientists carry out research
  • They write up their results
  • They submit them to a journal
  • Other scientists act as peer reviewers and
    editorial advisers
  • Finally, the publisher sells access to that
    research back to the scientific community

5
Whats wrong with this status quo?
  • Restricted redistribution of scientific research
    is contrary to the interests of
  • the scientists who do the research
  • the funders who pay for it
  • society as a whole
  • It is an historical artefact of the economics of
    print publishing

6
BioMed Central the first Open Access publisher
  • Part of Current Science Group
  • Published first article in mid-2000
  • Strict policy of immediate open access to all
    research articles

7
Scientific benefits of Open Access
  • Quicker, more direct access to research results
  • Research is equally accessible to all scientists,
    not just those at the richest institutions
  • Even for the fortunate few, Open Access gets rid
    of the frustration with passwords, logins and
    subscriptions
  • Ability to manipulate, analyze, and mine the
    literature for knowledge

8
Economic benefits of Open Access
  • Cost per article access for Elsevier journals
    estimated at approx US 11(Washington State
    University estimate)
  • A typical BioMed Central open-access research
    article receives 2000 full text accesses in the
    2 years following publication, and a similar
    number of accesses again via PubMed Central.
  • Cost to the scientific community 500. So cost
    per access 500/(20002) 0.125
  • Cost-per access reduced almost 100-fold!

9
Momentum for Open Access
  • PubMed Central
  • Public Library of Science
  • Open Access declarationsBudapest/Bethesda/Berlin

  • Software open-source movement
  • Mass cancellation of titles from traditional
    publishers

10
BioMed Centrals business model for open access
publishing
  • Keep costs down via
  • Online submission and peer review
  • Automated tools to streamline article processing,
    conversion and layout
  • Processing charge (currently 500) for accepted
    articles
  • No processing charge for authors at member
    institutions

11
Institutional membership
More than 350 major institutions are members of
BioMed Central, including, to name just a few
  • CalTech
  • Cancer Research UK
  • Columbia University
  • Cornell University
  • University of California
  • Dana-Farber Cancer Institute
  • Harvard University
  • INSERM
  • Imperial College
  • Institut Pasteur
  • John Innes Centre
  • Johns Hopkins University
  • Kyoto University
  • Max Planck Institutes
  • Memorial Sloan-Kettering Cancer Center
  • MRC Laboratory of Molecular Biology
  • National Institutes of Health
  • National Institute for Medical Research
  • NHS England
  • Princeton University
  • Rockefeller University
  • TIGR
  • TSRI
  • Tufts University
  • Wellcome Trust Sanger Institute
  • University of Wisconsin
  • World Health Organization
  • Yale University

12
Summary of talk
  • What is Open Access publishing and why is it
    necessary?
  • The growth of BioMed Central as an Open Access
    publisher
  • The benefits of Open Access for Digital Archiving

13
3 categories of journals published by BioMed
Central
  • BMC series of online journals
  • Policy to accept all sound research, and to
    editorially highlight the best
  • Scientist-run online journals
  • Editorial board determines acceptance policy
  • Print/online journals
  • Highly selective

14
BMC series of online journals
  • BMC Biochemistry
  • BMC Bioinformatics
  • BMC Biotechnology
  • BMC Cell Biology
  • BMC Chemical Biology
  • BMC Developmental Biology
  • BMC Ecology
  • BMC Evolutionary Biology
  • BMC Genetics
  • BMC Genomics
  • BMC Immunology
  • BMC Microbiology
  • BMC Molecular Biology
  • BMC Neuroscience
  • BMC Pharmacology
  • BMC Physiology
  • BMC Plant Biology
  • BMC Structural Biology
  • BMC Anesthesiology
  • BMC Blood Disorders
  • BMC Cancer
  • BMC Cardiovascular Disorders
  • BMC Clinical Pathology
  • BMC Clinical Pharmacology
  • BMC Complementary and Alternative Medicine
  • BMC Dermatology
  • BMC Ear, Nose and Throat Disorders
  • BMC Emergency Medicine
  • BMC Endocrine Disorders
  • BMC Family Practice
  • BMC Gastroenterology
  • BMC Geriatrics
  • BMC Health Services Research
  • BMC Infectious Diseases
  • BMC International Health and Human Rights
  • BMC Medical Education
  • BMC Medical Ethics
  • BMC Medical Imaging
  • BMC Medical Informatics and Decision Making
  • BMC Medical Research Methodology
  • BMC Musculoskeletal Disorders
  • BMC Nephrology
  • BMC Neurology
  • BMC Nuclear Medicine
  • BMC Nursing
  • BMC Ophthalmology
  • BMC Oral Health
  • BMC Palliative Care
  • BMC Pediatrics
  • BMC Pregnancy and Childbirth
  • BMC Psychiatry
  • BMC Public Health
  • BMC Pulmonary Medicine
  • BMC Surgery
  • BMC Urology
  • BMC Women's Health

15
BMC Cancer
16
Two new BMC-series journals
  • Will publish research of broad interest

17
Scientist-run online journals
45 such journals started so far, including
18
Malaria Journal
19
La crème de la crème
20
La crème de la crème
21
Growth of BioMed Central
22
Facts and figures
  • 3700 Open Access research articles published
  • 2144 in BMC online journal series
  • 1158 in scientist-run online journals
  • 650 in print/online journals
  • Full text article accesses to date
  • 7,000,000 (excluding mirrors)

23
Open access leads to high visibility
  • Indexing/Linking
  • PubMed
  • MEDLINE
  • ISI
  • BIOSIS
  • CAS
  • CrossRef
  • Scirus
  • Open Archive Initiative
  • Citebase
  • Google
  • Archiving
  • PubMed Central
  • INIST
  • LOCKSS
  • Max Planck
  • OhioLINK

24
Open Access and citation impact
25
Summary of talk
  • What is Open Access publishing and why is it
    necessary?
  • The growth of BioMed Central as an Open Access
    publisher
  • The benefits of Open Access for Digital Archiving

26
OAI interface
  • BioMed Central has operated an OAI interface
    (Open Archives Initiative Metadata Harvesting
    Protocol) since June 2001
  • The following metadata formats are offered for
    all articles
  • oai_dc (standard Dublin Core XML)
  • bmc_bibl (BioMed Centrals own XML)
  • bmc_references (article reference list XML)
  • In addition, for Open Access articles, full text
    XML is available
  • bmc_article
  • More info http//www.biomedcentral.com/info/libra
    ries/oai/

27
Data feeds to mirror sites and other archives
  • Automated nightly feed goes to
  • PubMed Central
  • OhioLINK
  • INIST/CNRS
  • Max Planck (Universität Potsdam)
  • your name here

28
Data mining
http//www.biomedcentral.com/info/about/datamining
  • Entire corpus of full text XML downloadable by
    ftp as a single zip file
  • Various groups working with the data
  • Pre-BIND (automatic extraction of protein binding
    information from full text)
  • BioLINK text mining competition
  • Standard NLM archiving/interchange DTD will help
    data miners

29
Conclusions
  • Open Access publishing is rapidly gaining
    momentum
  • It can make life much simpler for digital
    archives
  • It facilitates the smooth flow of scientific
    research information
  • It encourages the development of innovative tools
    for mining and navigating that information
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