GrainGenes Probe Collection

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GrainGenes Probe Collection

• Over 30,000 probes listed
• probe sources
• 990 listed for Avena
• 5,918 listed for Hordeum
• 12,601 listed for Triticum
• 288 listed for Secale

www.graingenes.org
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GrainGenes Probe Distribution

• Model Species Rice (TIGR Release 5, 2007)

Coverage to Rice Chromosomes by Probes Derived
from GrainGenes Resource
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GrainGenes Probe Distribution

• Model Species Brachypodium distachyon (JGI 4X,
  2008)

Coverage to Brachypodium 4X Supercontigs by
Probes Derived from GrainGenes Resource
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Example Oat Maps Compared
KxO, 2003
KxO, 2003
Brachy.
Oat
Rice
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Rice Chr 3 vs Brachy super(0/1)
super_1
super_0
Rice chr3
6
Oat 22_4418 vs Rice 3 Brachy s_0
Rice chr3
super_0
KxO, 2003
7
Oat 22_4418 vs Rice 3 Brachy s_0
super_0
Rice chr3
KxO, 2003