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A challenge to electronic structure theory from magnetic resonance experiments

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Ray Dupree, Cristel Gervais amino acids ... Rachel Strong EPR g-tensor. Biological systems. Itzam De Gortari, Matt Segall amyloid fibrils ... – PowerPoint PPT presentation

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Title: A challenge to electronic structure theory from magnetic resonance experiments


1
A challenge to electronic structure theory from
magnetic resonance experiments
  • Seeing atoms with quantum mechanics

2
Theory working with experiments
Diffraction spots
Quantitative theory
Solved structure
3
Magnetic Resonance
NMR
EPR
Chemical shielding tensors Electric field
gradients J-coupling constants
g-tensors Hyperfine coupling constants
4
What is nuclear magnetic resonance?
5
What is special about solid state NMR?
Chemical shift anisotropy
Quadrupolar coupling
Dipolar coupling
Electronic structure and bonding
Internuclear proximities and distances
Motional processes
6
Magic angle spinning (MAS)
7
Why bother with a theory of SS-NMR?
To help experimentalists
To test our theories
  • Comparison to accurate, repeatable experimentally
    determined parameters is an unforgiving test of
    theory
  • There is a abundance of high quality NMR data
    available
  • Disagreement with this data will force advances
    in theory
  • NMR is a ubiquitous experimental technique
  • Particularly in the solid state a lack of an
    empirical understanding of structure-spectra
    correlations
  • Help the assignment of spectra, testing of
    hypotheses and design of experiments

8
Chemical Shielding
Calculate the induced current in the
system Obtain the chemical shielding, s
Use perturbation theory
9
The cluster approximation
  • Need to choose as small a cluster as possible
  • How the cluster is built is crucial to ensure
    rapid convergence with size
  • How should the cluster be terminated in covalent
    systems?
  • How should the electrostatics be dealt with in
    ionic systems?
  • This seems like a lot of hard work why not use
    the translational symmetry of the crystal?

10
The cluster approximation
  • Need to choose as small a cluster as possible
  • How the cluster is built is crucial to ensure
    rapid convergence with size
  • How should the cluster be terminated in covalent
    systems?
  • How should the electrostatics be dealt with in
    ionic systems?
  • This seems like a lot of hard work why not use
    the translational symmetry of the crystal?

11
A solid state pseudopotential theory of Nuclear
Magnetic Resonance
Solid state
Pseudopotential
  • A naïve extension of the quantum chemical problem
    will fail
  • This is due to the classic problem of
    perturbation operators proportional to r
  • Mauri, Pfrommer and Louie solved this in 1996
  • Take the long wavelength limit of a slowly
    varying B field instead
  • It was not initially expected that a
    pseudopotential theory could exist
  • The core contribution was thought to be dependent
    on the chemical environment
  • Gregor, Mauri, Car showed that this was not true
  • But there was still the problem of dealing with
    the pseudowavefunction near the nucleus

12
Pseudopotentials are all-electron
  • Ab initio pseudopotential calculations always
    were all-electron just not thought of that way
  • This changed with Blöchls Projector Augmented
    Waves (PAW)
  • The core electrons can be relaxed
  • all-electron pseudopotentials
  • And they are relativistic
  • scalar relativistic by construction, and through
    ZORA for chemical shifts
  • spin-orbit pseudopotentials

13
The GIPAW method
  • Theory
  • Based on the plane wave pseudopotential approach
  • Periodic boundary conditions
  • All-electron results recovered using gauge
    including projector augmented waves (GIPAWs)
  • Performance
  • Results for single molecules same as Quantum
    Chemical approaches
  • Same quality of results for infinite crystals
  • Straightforward convergence with basis set
  • Computational cost
  • L-Glutamic Acid 84 atoms about 16hrs on a
    2.8GHz P4
  • around 100 atoms on a PC
  • around 200 atoms on a cluster
  • up to 1000 atoms supercomputer

14
Amino acids glutamic acid
  • Oxygen-17 NMR
  • a uniquely valuable probe of hydrogen-bonding
  • few studies in organic compounds due to large
    quadrupolar interaction
  • Using the GIPAW method
  • we assign the spectra of L-Glutamic Acid.HCl
  • find correlations between NMR parameters and
    hydrogen-bond strength

15
A solid state theory for J-coupling
  • First theory for extended systems
  • No gauge origin problem
  • Extreme test of accuracy
  • All terms computed using PAW
  • Systematic convergence with basis

16
Hydrogen bonds in aminofulvene aldimines
H
Solution
N9
N1
2JN1N9 9.0 Hz 8.92 Hz
2JN1N9 8.0 Hz 8.48 Hz
Solid
H
N9
N1
2JN1N9 8.6 Hz 8.56 Hz
2JN1N9 7.2 Hz 8.06 Hz
17
Challenge 1 DFT structures
P2 defect in silica two low T ( 18
EPR g-tensor allows identification
19
Challenge 2 dynamics
25Mg chemical shift in MgO
20
MgO and CaO
  • MgO and CaO have the same structure
  • But, Ca has upoccupied 3d states near the
    occupied states
  • Mg-O is purely ionic
  • Ca-O is iono-covalent (the Ca 3d can partially
    hybridise with the O 2p)

21
Challenge 3 DFT response properties
22
Theoretical context
  • DFT-LDA/GGA does not give the correct excited
    state spectrum
  • The band gap problem exists for all insulators
  • But, we observe the chemical shifts to be
    generally good
  • The situation can be more complex localised
    orbitals can be shifted relatively
  • This can change the degree of hybridisation
  • This changes the calculated response properties

23
Comparison with GW results
GW data from Atsushi Yamasaki
24
Solving structures
  • Imagine we can meet the challenges
  • We can calculate parameters for any configuration
    of atoms
  • Even non-physical ones
  • We could move the atoms until our theory matches
    experiment
  • Solving the inverse problem
  • Gradients of parameters can be evaluated using
    DFTPT
  • We have first order wavefunctions with respect to
    ionic positions as well (phonons)

25
Outlook
  • We already have a useful technique to complement
    solid state magnetic resonance experiments
  • Chemical shift tensors
  • Quadrupolar coupling
  • g-tensors
  • Hyperfine parameters
  • J-coupling
  • There are still challenges
  • DFT structures
  • DFT response properties
  • Temperature
  • Modern electronic structure methods have a unique
    opportunity to revolutionise the interpretation
    of magnetic resonance experiments
  • Can we develop a quantitative theory of solid
    state NMR to match that of diffraction based
    methods?

26
First principles NMR
Porphyrins
Pharmaceutical polymorphs
1H 13C
1H, 13C, 19F
Tellurite glasses
Amino acids
Zirconates
17O 23Na 125Te
17O 31P
27
Projects and collaborators
  • Minerals and glasses
  • Ian Farnan, Sharon Ashbrook, Laurent Le Polles,
    Etienne Balan, Stephanie Rossano minerals
  • Bjoern Winkler, Ute Hantsch silicates
  • Michele Warren Al/Si disorder
  • Thibault Charpentier Na silicate glasses
  • Magali Benoit, Mickael Profeta Ca silicate
    glasses
  • Theoretical Developments
  • Francesco Mauri
  • Jonathan Yates chemical shifts
  • Sian Joyce J-coupling constants
  • Rachel Strong EPR g-tensor
  • Molecular crystals
  • Robin Harris, Phuong Ghi pharmaceutical
    polymorphism
  • Ray Dupree, Cristel Gervais amino acids
  • Steven Brown sugars and guanine ribbons,
    J-couplings
  • Biological systems
  • Itzam De Gortari, Matt Segall amyloid fibrils
  • Melinda Duer, Helen Chappell hydroxyapatite
    and bone
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