Institutional Internal Integration Workshop

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Institutional Internal Integration Workshop
caTissue CAE caTIES

• Siteman Cancer Center
• Washington University School Of Medicine
• St. Louis, Missouri

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Outline
Introduction Adoption strategies Integration use
cases and mock screen shots
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Introduction

• We are
• caTissue Core developer
• CAE and caTIES adopter
• Upcoming
• Experimental Annotations Module (caEAM) developer
• caTissue Core Enhancements

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Adoption Strategy - CAE

• Phase I
• Deployed locally
• Tested for Query, CSM, Audit and API modules
• Phase II
• Will be testing with a small set of actual
  hospital data
• Enhance caTissue Core to retrieve annotations
  from CAE

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Adoption Strategy - caTIES

• Phase I
• Deployed locally
• Completed sanity check of caCORE Like APIs
• Phase II
• Will be testing with real data for
  deidentification, concept coding, Query and API
  modules
• Will be in production after IRB approval
• Enhance caTissue Core to retrieve SPRs from caTIES

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Integration Principles

• Nothing to do with ITBS, unified UI, integrated
  model, powerful query interface, etc etc
• It is
• Link caTissue Core objects with corresponding
  clinical and pathology data
• Basic integration (just enabling some buttons)
• Link applications based on SPR numbers or patient
  matching algorithms

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The Big Picture
Clinical IS
Laboratory IS
caTissue CAE
caTissue Core
Pathology Data
caTissue Core
caTIES
Web Interface
API
API and Grid services
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caTIES Integration Use Cases

• Use case I Link objects
• Participant, Specimen Collection Group, Specimen
• Use case II Query View
• Query for caTissue Core specimens based on
  concept code or text
• View SPRs in the Query Results View
• Export SPRs along with caTissue Core data

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CAE Integration Use Cases

• Use case I - Link objects
• Participant, Specimen Collection Group, Specimen
• Use case II Query View
• Query for caTissue Core specimens based on
  predicates on annotations
• View annotations in Query Results View
• Export annotations along with caTissue Core data

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Mock screen shots
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View SPR Specimen Collection Group
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View SPR Specimen
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Query with SPRs
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(No Transcript)
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Progress

• Validated the capabilities of API support of CAE
  and caTIES
• Working on use cases, requirements and soon
  design documents
• Expecting release by June/July 06 timeframe
  (maybe along with next release caTissue Core)